مطالعه‌ عدم تعادل پیوستگی و شناسایی ساختار بلوک‌های هاپلوتیپی در گاوهای سرابی

حسین زاده م(1386) معرفی نژادهای گاو شیری، گوشتی، دورگ و ایرانی. چاپ دوم، انتشارات پریور، تبریز، ص 93-85.

2.فلاحی م ح (1395)مطالعه  و  شناسایی ساختار هاپلوتیپی گاومیش­های  نژاد  آذربایجانی. پایان‌نامه کارشناسی ارشد. دانشگاه تهران.

3. Ardlie K, Kruglyak L and Seielstad M (2002) Patterns of linkage disequilibrium in the human genome. Nature Reviews Genetics. 3(4): 299-309.

4. Barbato M, Orozco-terWengel P, Tapio M and Bruford M (2015) SNeP a tool to estimate trends in recent effective population size trajectories using genome-wide SNP data. Frontiers in genetics, 6.

5.Barrett J, Fry B, Maller J and Daly M (2004) Haploview analysis and visualization of LD and haplotype maps. Bioinformatics. 21(2):263-265.

6. Bohmanova J, Sargolzaei M and Schenkel F (2010) Characteristics of linkage disequilibrium in North American Holsteins. BMC genomics. 11(1): 421

7. Browning S and Browning B (2007) Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering. The American Journal of Human Genetics. 81(5): 1084-1097.

8. Corbin L, Liu A, Bishop S and Woolliams J (2012) Estimation of historical effective population size using linkage disequilibria with marker data. Journal of Animal Breeding and Genetics. 129(4):257-270.

9.Espigolan R, Baldi F , Boligon A , Souza F, Gordo D, Tonussi R and Schenkel F (2013) Study of whole genome linkage disequilibrium in Nellore cattle. BMC genomics 14(1): 305.

10.Farnir F, Coppieters W, Arranz J, Berzi P and Cambisano N (2000) Extensive genome-wide linkage disequilibrium in cattle. Genome Res. 10: 220–227

11. Farré M, Micheletti D and Ruiz-Herrera A (2012) Recombination rates and genomic shuffling in human and chimpanzee a new twist in the chromosomal speciation theory. Molecular Biology and Evolution. 30(4): 853-864.

12. Frankham R, Bradshaw C and Brook B (2014) Genetics in conservation management: revised recommendations for the 50/500 rules, Red List criteria and population viability analyses. Biological Conservation. 170: 56-63.

13. Gabriel S, Schaffner S, Nguyen H, Moore J, Roy J, Blumenstiel B and Liu-Cordero S (2002). The structure of haplotype blocks in the human genome. Science. 296(5576): 2225-2229

14. Gautier M, Faraut T, Moazami-Goudarzi K, Navratil V, Foglio M, Grohs C and Gut I (2007) Genetic and haplotypic structure in 14 European and African cattle breeds. Genetics. 177(2): 1059-1070

15. Hill W and Robertson A (1968) Linkage disequilibrium in finite populations. TAG Theoretical and Applied Genetics. 38(6): 226-231.

16. Hayes B (2007) QTL mapping MAS and genomic selection A. short-course. Animal Breeding & Genetics Department of Animal Science. Iowa State University. 1(1): 3-4.

17. Khatkar M, Collins A, Cavanagh J, Hawken, R ,Hobbs M, Zenger K and Raadsma H (2006) A first-generation metric linkage disequilibrium map of bovine chromosome 6. Genetics. 174(1): 79-85.

18. Khatkar M, Zenger K, Hobbs M, Hawken R, Cavanagh J, Barris W and Nicholas F (2007) A primary assembly of a bovine haplotype block map based on a 15,036-single-nucleotide polymorphism panel genotyped in Holstein–Friesian cattle. Genetics. 176(2): 763-772.

19.Mokry F, Buzanskas M, de Alvarenga Mudadu M, do Amaral Grossi, D, Higa R,Ventura, R and da Silva, M (2014) Linkage disequilibrium and haplotype block structure in a composite beef cattle breed. BMC genomic. 15(7): S6

20. Reich D and Lander E (2001) on the allelic spectrum of human disease. TRENDS in Genetics. 17(9): 502-510.

21. Sargolzaei M, Schenkel F, Jansen G and Schaeffer L (2008) Extent of linkage disequilibrium in Holstein cattle in North America. Journal of Dairy Science. 91(5): 2106-2117.

22.Sabeti P, Reich D, Higgins J, Levine H, Richter D, Schaffner S and Ackerman H (2002) Detecting recent positive selection in the human genome from haplotype structure. Nature. 419(6909): 832-837.

23. Sved J (1971) Linkage disequilibrium and homozygosity of chromosome segments in finite populations. Theoretical population biology. 2(2): 125-141.

24.Varilo T, Paunio T, Parker A, Perola M, Meyer J, Terwilliger J and Peltonen L (2003) The interval of linkage disequilibrium detected with microsatellite and SNP markers in chromosomes of Finnish populations with different histories. Human Molecular Genetics. 12(1): 51-59.

25. Zhao H, Nettleton D, Soller M and Dekkers J (2005) Evaluation of linkage disequilibrium measures between multi-allelic markers as predictors of linkage disequilibrium between markers and QTL. Genetical research. 86(01): 77-87.