- Abdi, H. (2007). Bonferroni and Šidák corrections for multiple comparisons. Encyclopedia of Measurement and Statistics, pp. 103-107.
- Agricultural ministry statistics. (2012).Tehran, Ministry of Agriculture, Deputy Director of Planning and Economics, Technology Center of Information and Communication. Vol 2. (in Farsi)
- Alberts, C.C., Ribeiro-Paes, J. T., Aranda-Selverio, G., Cursino-Santos, J. R., Moreno-Cotulio, V. R., Oliveira, A. L., Porchia, B. F., Santos, W. F. & Souza, E. B. (2010). DNA extraction from hair shafts of wild Brazilian felids and canids. Genet Mol Res, 9(4), 2429-2435.
- Barendse, W., Harrison, B. E., Bunch, R. J., Thomas, M. B. & Turner, L. B. (2009). Genome wide signatures of positive selection: the comparison of independent samples and the identification of regions associated to traits. BMC Genomics, 10(1), 178.
- Ekblom, R. & Galindo, J. (2011). Applications of next generation sequencing in molecular ecology of non-model organisms. Heredity, 107(1), 1-15.
- Epps, C. W., Castillo, J. A., Schmidt-Küntzel, A., du Preez, P., Stuart-Hill, G., Jago, M. & Naidoo, R. (2013). Contrasting historical and recent gene flow among African buffalo herds in the Caprivi Strip of Namibia. Journal of Heredity, ess142.
- Grimberg, J., Nawoschik, S., Belluscio, L., McKee, R., Turck, A. & Eisenberg, A. (1989). A simple and efficient non-organic procedure for the isolation of genomic DNA from blood. Nucleic Acids Research, 17(20), 8390-8390.
- Jemaa, S. B., Boussaha, M., Mehdi, M. B., Lee, J. H. & Lee, S. H. (2015). Genome-wide insights into population structure and genetic history of Tunisian local cattle using the illumina bovinesnp50 beadchip. BMC Genomics, 16(1), 1.
- Jolliffe, I. (2002). Principal component analysis. Wiley Online Library.
- Jombart, T. & Collins, C. (2015). A tutorial for discriminant analysis of principal components (DAPC) using adegenet 2.0. 0. London: Imperial College London, MRC Centre for Outbreak Analysis and Modelling.
- Jombart, T., Devillard, S. & Balloux, F. (2010). Discriminant analysis of principal components: a new method for the analysis of genetically structured populations. BMC genetics, 11(1), 94.
- Laloë, D., Jombart, T. Dufour, A.-B. & Moazami-Goudarzi, K. (2007). Consensus genetic structuring and typological value of markers using multiple co-inertia analysis. Genetics Selection Evolution, 39(5), 1-23.
- Lao, O., Lu, T. T., Nothnagel, M., Junge, O., Freitag-Wolf, S., Caliebe, A., Balascakova, M., Bertranpetit, J., Bindoff, L. A. & Comas, D. (2008). Correlation between genetic and geographic structure in Europe. Current Biology, 18(16), 1241-1248.
- Lee, C., Abdool, A., & Huang, C.-H. (2009). PCA-based population structure inference with generic clustering algorithms. BMC bioinformatics, 10(Suppl 1), S73.
- Li, Q. & Yu, K. (2008). Improved correction for population stratification in genome‐wide association studies by identifying hidden population structures. Genetic epidemiology, 32(3), 215-226.
- Liu, N. & Zhao, H. (2006). A non-parametric approach to population structure inference using multilocus genotypes. Human genomics, 2(6), 1.
- Patterson, N., Price, A. L. & Reich, D. (2006). Population structure and eigenanalysis. PLoS Genet, 2(12), e190.
- Peason, K. (1901). On lines and planes of closest fit to systems of point in space. Philosophical Magazine, 2, 559-572.
- Pometti, C. L., Bessega, C. F., Saidman, B. O. & Vilardi, J. C. (2014). Analysis of genetic population structure in Acacia caven (Leguminosae, Mimosoideae), comparing one exploratory and two Bayesian-model-based methods. Genetics and Molecular Biology, 37(1), 64-72.
- Price, A. L., Patterson, N. J., Plenge, R. M., Weinblatt, M. E., Shadick, N. A. & Reich, D. (2006). Principal components analysis corrects for stratification in genome-wide association studies. Nature Genetics, 38(8), 904-909.
- Sethuraman, A. (2013). On inferring and interpreting genetic population structure-applications to conservation, and the estimation of pairwise genetic relatedness. Ph.D. Thesis.Iowa State University, Paper 13332. U.S.
- Teo, Y. Y., Fry, A. E., Clark, T. G., Tai, E. & Seielstad, M. (2007). On the usage of HWE for identifying genotyping errors. Annals of Human genetics, 71(5), 701-703.
- Thomas, D. C. & Witte, J. S. (2002). Point: population stratification: a problem for case-control studies of candidate-gene associations? Cancer Epidemiology Biomarkers & Prevention, 11(6), 505-512.
- Wacholder, S., Rothman, N. & Caporaso, N. (2002). Counterpoint: bias from population stratification is not a major threat to the validity of conclusions from epidemiological studies of common polymorphisms and cancer. Cancer Epidemiology Biomarkers & Prevention, 11(6), 513-520.
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