تعیین جنسیت مولکولی ماهی آزاد دریای خزر (Salmo caspius) با استفاده از جایگاه تعیین جنسیت SRY

Bertho, S., Herpin, A., Jouanno, E., Yano, A., Bobe, J., Parrinello, H., Journot, L., Guyomard, R., Muller, T., Swanson, P., McKinney, G., 2022. A nonfunctional copy of the salmonid sex-determining gene (sdy) is responsible for the “apparent” XY females in Chinook salmon, Oncorhynchus tshawytscha. G3 Genes/Genomes/Genetics, 12(2), 451. DOI: 10.1093/g3journal/jkab451

Bertho, S., Herpin, A., Schartl, M., Guiguen, Y., 2021. Lessons from an unusual vertebrate sex-determining gene. Philosophical Transactions of the Royal Society B, 376(1832), 20200092. DOI: 10.1098/rstb.2020.0092

Brown, M.S., Evans, B.S., Afonso, L.O., 2020. Discordance for genotypic sex in phenotypic female Atlantic salmon (Salmo salar) is related to a reduced sdY copy number. Scientific Reports, 10(1), 9651. DOI: 10.1038/s41598-020-66406-x

Cavileer, T.D., Hunter, S.S., Olsen, J., Wenburg, J., Nagler, J.J., 2015. A sex‐determining gene (sdY) assay shows discordance between phenotypic and genotypic sex in wild populations of Chinook Salmon. Transactions of the American Fisheries Society, 144(2), 423-430. DOI: 10.1080/00028487.2014.993479

Eisbrenner, W.D., Botwright, N., Cook, M., Davidson, E.A., Dominik, S., Elliott, N.G., Henshall, J., Jones, S.L., Kube, P.D., Lubieniecki, K.P. and Peng, S., 2014. Evidence for multiple sex-determining loci in Tasmanian Atlantic salmon (Salmo salar). Heredity, 113(1), pp.86-92.

Habibi, E., Kalbassi, M., Hosseini, S., Qasemi, S., 2013. Feasibility analysis of sex determination of caspian trout (Salmo trutta caspius, Kessler, 1877) using AFLP markers. Modern Genetics Journal 7(4). (In Persian)

Hashemzadeh Segherloo, I., Freyhof, J., Berrebi, P., Ferchaud, A.L., Geiger, M., Laroche, J., Levin, B.A., Normandeau, E., Bernatchez, L., 2021. A genomic perspective on an old question: Salmo trout or Salmo trutta (Teleostei: Salmonidae). Molecular Phylogenetics and Evolution, 162, 107204. DOI: 10.1016/j.ympev.2021.107204

Hashemzadeh Segherloo, I., Tabatabaei, S.N., Abdoli, A., Freyhof, J., Normandeau, E., Levin, B., Geiger, M.F., Laporte, M., Hallerman, E., Bernatchez, L., 2022. Biogeographic insights from a genomic survey of Salmo trout from the Aarlo-Caspian regions. Hydrobiologia, 849(19), 4325-4339. DOI: 10.1007/s10750-022-04993-8

Hattori, R.S., Murai, Y.U., Oura, M., Masuda, S., Majhi, S.K., Sakamoto, T., Sakamoto, J.I. Fernandino Somoza, G.M., Yokota, M., Strüssmann, C.A., 2012. A Y-linked anti-Mullerian hormone duplication takes over a critical role in sex-determination. Proceedings of the National Academy of Sciences of the United States of America 109(8), 2955-2959. DOI: 10.1073/pnas.1018392109

Hillis, D.M., Moritz, C., Mable, B.K., 1996. Molecular systematics (Vol. 23). Sinauer.

Ieda, R., Hosoya, S., Tajima, S., Atsumi, K., Kamiya, T., Nozawa, A., Aoki, Y., Tasumi, S., Koyama, T., Nakamura, O., Suzuki, Y., 2018. Identification of the sex-determining locus in grass puffer (Takifugu niphobles) provides evidence for sex-chromosome turnover in a subset of Takifugu species. PLoS One, 13(1), e0190635. DOI: 10.1371/journal.pone.0190635

Jouladeh-Roudbar, A., Ghanavi, H.R. and Doadrio, I., 2020. Ichthyofauna from Iranian freshwater: Annotated checklist, diagnosis, taxonomy, distribution and conservation assessment. Zoological Studies, 59. DOI: 10.6620/ZS.2020.59-21

Kamiya, T., Kai, W., Tasumi, S., Oka, A., Matsunaga, T., Mizuno, N., Fujita, M., Suetake, H., Suzuki, S., Hosoya, S., Tohari, S., 2012. A trans-species missense SNP in Amhr2 is associated with sex determination in the tiger pufferfish, Takifugu rubripes (fugu). PLoS Genetics, 8(7), e1002798. DOI: 10.1371/journal.pgen.1002798

Kijas, J., McWilliam, S., Naval Sanchez, M., Kube, P., King, H., Evans, B., Nome, T., Lien, S., Verbyla, K., 2018. Evolution of sex determination loci in Atlantic salmon. Scientific Reports, 8(1), 5664. DOI: 10.1038/s41598-018-23984-1

Kuhl, H., Guiguen, Y., Höhne, C., Kreuz, E., Du, K., Klopp, C., Lopez-Roques, C., Yebra-Pimentel, E.S., Ciorpac, M., Gessner, J., Holostenco, D., 2021. A 180 Myr-old female-specific genome region in sturgeon reveals the oldest known vertebrate sex determining system with undifferentiated sex chromosomes. Philosophical Transactions of the Royal Society B, 376(1832), 20200089. DOI: 10.1098/rstb.2020.0089

Li, J., Phillips, R.B., Harwood, A.S., Koop, B.F., Davidson, W.S., 2011. Identification of the sex chromosomes of brown trout (Salmo trutta) and their comparison with the corresponding chromosomes in Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss). Cytogenetic and Genome Research, 133(1), 25-33. DOI: 10.1159/000323410

Lubieniecki, K.P., Lin, S., Cabana, E.I., Li, J., Lai, Y.Y., Davidson, W.S., 2015. Genomic instability of the sex-determining locus in Atlantic salmon (Salmo salar). G3: Genes, Genomes, Genetics, 22, 2513-22. DOI: 10.1534/g3.115.020115

Makhrov, A.A., Artamonova, V.S., Kolmakova, O.V., Ponomareva, M.V., 2018, January. Sex determination model in pink salmon Oncorhynchus gorbuscha (Walbaum, 1792) (Salmonidae, Osteichthyes) controlled by multi-copy genes located in sex chromosomes. In Doklady Biochemistry and Biophysics (Vol. 478, No. 1, pp. 21-24). Moscow: Pleiades Publishing.

Martínez, P., Viñas, A.M., Sánchez, L., Díaz, N., Ribas, L., Piferrer, F., 2014. Genetic architecture of sex determination in fish: applications to sex ratio control in aquaculture. Frontiers in genetics, 5, p.340. DOI: 10.3389/fgene.2014.00340/full

Matsuda, M., Nagahama, Y., Shinomiya, A., Sato, T., Matsuda, C., Kobayashi, T., Morrey, C.E., Shibata, N., Asakawa, S., Shimizu, N., Hori, H., 2002. DMY is a Y-specific DM-domain gene required for male development in the medaka fish. Nature, 417(6888), 559-563. DOI: 10.1038/nature751

Matsuda, M., Shinomiya, A., Kinoshita, M., Suzuki, A., Kobayashi, T., Paul-Prasanth, B., Lau, E.L., Hamaguchi, S., Sakaizumi, M., Nagahama, Y., 2007. DMY gene induces male development in genetically female (XX) medaka fish. Proceedings of the National Academy of Sciences, 104(10), 3865-3870. DOI: 10.1073/pnas.0611707104

Myosho, T., Otake, H., Masuyama, H., Matsuda, M., Kuroki, Y., Fujiyama, A., Naruse, K., Hamaguchi, S. and Sakaizumi, M., 2012. Tracing the emergence of a novel sex-determining gene in medaka, Oryzias luzonensis. Genetics, 191(1), 163-170. DOI: 10.1534/genetics.111.137497

Ninua, L., Tarkhnishvili, D., Gvazava, E., 2018. Phylogeography and taxonomic status of trout and salmon from the Ponto‐Caspian drainages, with inferences on European Brown Trout evolution and taxonomy. Ecology and Evolution, 8(5), 2645-2658. DOI: 10.1002/ece3.3884

Quéméré, E., Perrier, C., Besnard, A.L., Evanno, G., Baglinière, J.L., Guiguen, Y., Launey, S., 2014. An improved PCR-based method for faster sex determination in brown trout (Salmo trutta) and Atlantic salmon (Salmo salar). Conservation Genetics Resources, 6, 825-827. DOI: 10.1007/s12686-014-0259-8

Salehi, M., Mousavi-Sabet, H., Eagderi, S., 2022. The Iranian native salmonids (Salmo caspius and S. trutta), distinct species or two forms of the same species; a geometric-morphometric based hypothesis. Aquaculture Sciences, 10(2), 25-34. (In Persian)

Schartl, M., 2004. A comparative view on sex determination in medaka. Mechanisms of Development, 121(7-8), 639-645. DOI: 10.1016/j.mod.2004.03.001

Shahhosseini, Gh., 2020. Meiotic gynogenesis inducing in Caspian Sea salmon (Salmo trutta caspius) using gamma irradiation followed by sex determination using SDY gene. Journal of Nuclear Science, Engineering and Technology (JONSAT), 41(3), 145-154. (In Persian)

Sutherland, B.J., Rico, C., Audet, C., Bernatchez, L., 2017. Sex chromosome evolution, heterochiasmy, and physiological QTL in the salmonid brook charr Salvelinus fontinalis. G3: Genes, Genomes, Genetics, 7(8), 2749-2762. DOI: 10.1534/g3.117.040915

Woram, R.A., Gharbi, K., Sakamoto, T., Hoyheim, B., Holm, L.E., Naish, K., McGowan, C., Ferguson, M.M., Phillips, R.B., Stein, J., Guyomard, R., 2003. Comparative genome analysis of the primary sex-determining locus in salmonid fishes. Genome Research, 13(2), 272-280.

Yano, A., Nicol, B., Jouanno, E., Quillet, E., Fostier, A., Guyomard, R., Guiguen, Y., 2013. The sexually dimorphic on the Y‐chromosome gene (sdY) is a conserved male‐specific Y‐chromosome sequence in many salmonids. Evolutionary Applications, 6(3), 486-496. DOI: 10.1111/eva.12032